PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KFK35097.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis
Family WRKY
Protein Properties Length: 272aa    MW: 30351.1 Da    PI: 4.644
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KFK35097.1genomeMPIPBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY92.72.7e-2969127259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 +D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers+ dp+ + itY  +Hnh+
  KFK35097.1  69 SDSWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRVDPTKLMITYACDHNHP 127
                 69*************************998****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.3E-3060129IPR003657WRKY domain
PROSITE profilePS5081131.50263129IPR003657WRKY domain
SuperFamilySSF1182903.92E-2564129IPR003657WRKY domain
SMARTSM007742.2E-3368128IPR003657WRKY domain
PfamPF031062.1E-2470127IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    Send to blast
MHRRGQESDD EEDETYNDVV PESPSSCEDS KISKPTPKKS RRNVEKRVVS VPIADVEGSK  60
SRGEVYPPSD SWAWRKYGQK PIKGSPYPRG YYRCSSSKGC PARKQVERSR VDPTKLMITY  120
ACDHNHPFPS SSNSKSHHHR TSVVLKSAKK EQTYEEDDEE EEEEEPTTVA TVVEEEPAGL  180
DLSHVDSPLL LGGCYSEIGE FGWFYDASIS SSSSGSDFLD VSFSVGEEDE SLFGDLGDLP  240
DCASVFRRGT VATEEQHRRC DFGAIPFCDS SR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2lex_A3e-1758130778Probable WRKY transcription factor 4
1wj2_A3e-1758130778Probable WRKY transcription factor 4
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAY0842331e-148AY084233.1 Arabidopsis thaliana clone 100465 mRNA, complete sequence.
GenBankBT0294701e-148BT029470.1 Arabidopsis thaliana At3g58710 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_851020.11e-160WRKY DNA-binding protein 69
SwissprotQ93WV51e-160WRK69_ARATH; Probable WRKY transcription factor 69
TrEMBLA0A087GYZ50.0A0A087GYZ5_ARAAL; Uncharacterized protein
STRINGAT3G58710.11e-160(Arabidopsis thaliana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM124781930
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58710.11e-147WRKY DNA-binding protein 69